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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797426.1_cds_XP_016455106.1_4861
CDS Infomation

[gene=LOC107779233] [db_xref=GeneID:107779233] [protein=putative lipase YDR444W isoform X2] [protein_id=XP_016455106.1] [location=join(71009..71156,73102..73246,73821..73888,74465..74535,75313..75573,76534..76697,76790..76845,76953..77005,78916..79084,79187..79284,79355..79471)] [gbkey=CDS]
Sequence

ATGGCGTTATCAGCTACATTAGTTCATCACTATTCTCCCCGCCCTTCTTTGTCTTGCAAT
TCCTGTTCATCTTCTCCTTCTTGTTCGTCATCTTCTTCATCCTTTGATCAACGCCGAGGG
TTCAATTGGAAATTCCTCAGCTTTTCTGGGATAAACAACATCTTGAGAAGTCAAAGCTAT
AAAGCCCATGCGATGAGTACAACTGAAGGAAGTATTGTGTCACCGAAAGGCTTGATGGAC
ATGGAGGAAGAACCTGAGCATCTTCTAGTCCTTGTTCATGGCATCTTAGCAAGCCCGGGT
GACTGGACGTATGTTCAAGCAGAGTTGAGGAGGCGGTTGGGAAGAAACTTTTTGATATAT
GCAAGTTCATGTAATACGTATACTAAAACCTTCACAGGGATTGATGGAGCTGGAGAACGA
CTAGCAGATGAAGTTAGGCTGGTTGTGAACAAAAGAGAAAGCCTAAAGAAGATATCCTTT
TTAGCTCATTCTCTTGGTGGATTGATTGCAAGATATGCAGTTGCCGCACTTTATTCATCA
AATGGTAGTGAGCAGACCGATGATACAGTCACTTCAACTAATGCAAACCTCAAACCAGTA
GGCTCCTTAAATGAAGGTTTGATTGCTGGCCTGGAGCCAGTCAATTTTATTACCTTGGCA
ACACCACATCTGGGTGTGAGAGGGAAAAATCAGCTTCCTTTTCTCTTCGGGTTGCCAATC
TTGGAGAAAATTGCAGCACCTATGGCTCCTATTTTTGTTGGTCAAACTGGTAGTCAGCTC
TTCCTTACTGATGGCCAACCTACTAAACCACCTCTGCTGCTAAGGATGGCATCAGACTGT
GATGATGGAAAATTTATATCAGCGCTTGGTGCTTTCAAATGTCGTGTTCTATATGCTAAT
GTCTCTTATGATCATATGGTCGGTTGGCGTACATCATCTATAAGGAGGGAGACAGAGCTC
GTTAAGCCCCCTTGGCGATCGTTGGATGGCTACAAACATGTAGTAGATGTGGAATACTGT
CCTCCAGCTTCATGTGAAGGACCCCATTACCCCCTCGAGGCAGCCAAAGCAAAGGAGGAA
GCTCAAAATGCAGCAAGCACGCAAAGTACATTAGAATATCATGAAAGTATGGAAGAGGAA
ATGATATGTGGCTTGCAACAGTTGGGGTGGAAGAAAGTTGATGTTAGCTTTCACTCGGCG
TTCTGGCCCTTTTTCGCGCATAACTTTATCCATGTGAAGAACGAATTCTTTCACAATGCT
GGAGCTGGAGTAATTTCTCATGTGGCCGACCACATAAAGCAACAAGAGAAGCAACCTGAG
TCGTCCTCATTAATTACCCCTAGCTTGTAG

Peptide Sequence

PEP ID

XP_016455106.1
PEP Infomation

PREDICTED: putative lipase YDR444W isoform X2 [Nicotiana tabacum]
Sequence

MALSATLVHHYSPRPSLSCNSCSSSPSCSSSSSSFDQRRGFNWKFLSFSGINNILRSQSY
KAHAMSTTEGSIVSPKGLMDMEEEPEHLLVLVHGILASPGDWTYVQAELRRRLGRNFLIY
ASSCNTYTKTFTGIDGAGERLADEVRLVVNKRESLKKISFLAHSLGGLIARYAVAALYSS
NGSEQTDDTVTSTNANLKPVGSLNEGLIAGLEPVNFITLATPHLGVRGKNQLPFLFGLPI
LEKIAAPMAPIFVGQTGSQLFLTDGQPTKPPLLLRMASDCDDGKFISALGAFKCRVLYAN
VSYDHMVGWRTSSIRRETELVKPPWRSLDGYKHVVDVEYCPPASCEGPHYPLEAAKAKEE
AQNAASTQSTLEYHESMEEEMICGLQQLGWKKVDVSFHSAFWPFFAHNFIHVKNEFFHNA
GAGVISHVADHIKQQEKQPESSSLITPSL

Transcript Sequence

Gene sequence data has not been registered.